Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ams1 | cbiF | gene:10499515 | gene:10497556 | Alpha-mannosidase; ORF_ID:slr0323. | Precorrin methylase; ORF_ID:slr0239; gene:cbiF or cobM. | 0.753 |
ams1 | mbpA | gene:10499515 | gene:10498595 | Alpha-mannosidase; ORF_ID:slr0323. | Adenine-specific DNA metylase; ORF_ID:slr1803. | 0.680 |
ams1 | rbpA | gene:10499515 | gene:10500315 | Alpha-mannosidase; ORF_ID:slr0323. | RNA binding protein; ORF_ID:sll0517. | 0.681 |
cbiF | ams1 | gene:10497556 | gene:10499515 | Precorrin methylase; ORF_ID:slr0239; gene:cbiF or cobM. | Alpha-mannosidase; ORF_ID:slr0323. | 0.753 |
cbiF | mbpA | gene:10497556 | gene:10498595 | Precorrin methylase; ORF_ID:slr0239; gene:cbiF or cobM. | Adenine-specific DNA metylase; ORF_ID:slr1803. | 0.680 |
cbiF | rbpA | gene:10497556 | gene:10500315 | Precorrin methylase; ORF_ID:slr0239; gene:cbiF or cobM. | RNA binding protein; ORF_ID:sll0517. | 0.680 |
mbpA | ams1 | gene:10498595 | gene:10499515 | Adenine-specific DNA metylase; ORF_ID:slr1803. | Alpha-mannosidase; ORF_ID:slr0323. | 0.680 |
mbpA | cbiF | gene:10498595 | gene:10497556 | Adenine-specific DNA metylase; ORF_ID:slr1803. | Precorrin methylase; ORF_ID:slr0239; gene:cbiF or cobM. | 0.680 |
mbpA | rbpA | gene:10498595 | gene:10500315 | Adenine-specific DNA metylase; ORF_ID:slr1803. | RNA binding protein; ORF_ID:sll0517. | 0.676 |
mbpA | sll0729 | gene:10498595 | gene:10500525 | Adenine-specific DNA metylase; ORF_ID:slr1803. | Modification methylase; ORF_ID:sll0729. | 0.945 |
mbpA | sll2002 | gene:10498595 | gene:10498593 | Adenine-specific DNA metylase; ORF_ID:slr1803. | ORF_ID:sll2002; hypothetical protein. | 0.441 |
mbpA | slr2144 | gene:10498595 | gene:10498594 | Adenine-specific DNA metylase; ORF_ID:slr1803. | ORF_ID:slr2144; unknown protein. | 0.645 |
rbpA | ams1 | gene:10500315 | gene:10499515 | RNA binding protein; ORF_ID:sll0517. | Alpha-mannosidase; ORF_ID:slr0323. | 0.681 |
rbpA | cbiF | gene:10500315 | gene:10497556 | RNA binding protein; ORF_ID:sll0517. | Precorrin methylase; ORF_ID:slr0239; gene:cbiF or cobM. | 0.680 |
rbpA | mbpA | gene:10500315 | gene:10498595 | RNA binding protein; ORF_ID:sll0517. | Adenine-specific DNA metylase; ORF_ID:slr1803. | 0.676 |
sll0729 | mbpA | gene:10500525 | gene:10498595 | Modification methylase; ORF_ID:sll0729. | Adenine-specific DNA metylase; ORF_ID:slr1803. | 0.945 |
sll2002 | mbpA | gene:10498593 | gene:10498595 | ORF_ID:sll2002; hypothetical protein. | Adenine-specific DNA metylase; ORF_ID:slr1803. | 0.441 |
sll2002 | slr2144 | gene:10498593 | gene:10498594 | ORF_ID:sll2002; hypothetical protein. | ORF_ID:slr2144; unknown protein. | 0.518 |
slr2144 | mbpA | gene:10498594 | gene:10498595 | ORF_ID:slr2144; unknown protein. | Adenine-specific DNA metylase; ORF_ID:slr1803. | 0.645 |
slr2144 | sll2002 | gene:10498594 | gene:10498593 | ORF_ID:slr2144; unknown protein. | ORF_ID:sll2002; hypothetical protein. | 0.518 |