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rpoD2-V protein (Synechocystis sp. PCC6803) - STRING interaction network
"rpoD2-V" - RNA polymerase sigma factor in Synechocystis sp. PCC6803
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rpoD2-VRNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (369 aa)    
Predicted Functional Partners:
ssl0410
Hypothetical protein (90 aa)
           
  0.830
sll0108
Ammonium/methylammonium permease (507 aa)
           
  0.759
ssl1300
PEMI-like protein homologue (85 aa)
           
  0.753
secA
Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (932 aa)
   
          0.729
glnN
Glutamate--ammonia ligase (724 aa)
           
  0.719
ntcA
Global nitrogen regulator; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control (225 aa)
           
  0.718
glnA
Glutamate--ammonia ligase (473 aa)
           
  0.668
narB
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (714 aa)
           
  0.629
icd
Isocitrate dehydrogenase (NADP+) (475 aa)
           
  0.629
rpoC1
RNA polymerase gamma-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (626 aa)
   
     
  0.615
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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