STRINGSTRING
sll1623 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1623" - ABC transporter in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1623ABC transporter (223 aa)    
Predicted Functional Partners:
slr1978
Hypothetical protein (291 aa)
 
  0.998
sll0384
Hypothetical protein (257 aa)
 
  0.967
sll0912
ABC transporter (636 aa)
         
  0.948
slr0075
ABC transporter subunit Ycf16 (256 aa)
 
 
   
  0.925
bioY
BioY protein (217 aa)
 
   
  0.907
slr0354
ABC transporter (210 aa)
 
   
0.907
sll1624
Regulatory component of sensory transduction system Rre18 (334 aa)
              0.829
cbiM
Cobalamin biosynthesis protein M (214 aa)
       
  0.785
sll1276
ABC transporter (534 aa)
   
0.775
cbiH
Precorrin methylase (627 aa)
   
 
  0.757
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (8%) [HD]