STRINGSTRING
sll1621 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1621" - Membrane protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1621Membrane protein (189 aa)    
Predicted Functional Partners:
slr0233
Thioredoxin M (105 aa)
     
  0.990
trxA
Thioredoxin; Component of the thioredoxin-thioredoxin reductase system. Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions (107 aa)
   
  0.988
slr1139
Thioredoxin (109 aa)
     
  0.987
sll0755
Thiol-specific antioxidant protein; Reduces peroxides. May play an important role in eliminating peroxides generated during metabolism (By similarity) (200 aa)
     
 
  0.974
slr1198
Rehydrin (211 aa)
     
 
  0.963
slr1738
Hypothetical protein (139 aa)
         
  0.880
slr1854
Hypothetical protein (198 aa)
     
      0.814
sll1159
Hypothetical protein (218 aa)
     
   
  0.802
sll0486
Clock protein KaiB (102 aa)
     
  0.799
sll1289
Hypothetical protein (194 aa)
     
  0.799
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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