STRINGSTRING
slr1740 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1740" - Extracellular solute-binding protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1740Extracellular solute-binding protein (582 aa)    
Predicted Functional Partners:
sll0312
OppB in a binding protein-dependent transportsystem (337 aa)
 
 
  0.976
sll0833
OppC in a binding protein-dependent transport system (371 aa)
 
  0.976
sll1927
ABC transporter (650 aa)
 
 
  0.964
slr0324
Probable oligopeptide ABC transporter permease protein (294 aa)
 
  0.956
sll1768
Probable oligopeptide ABC transporter permease protein (326 aa)
 
 
  0.955
slr1739
PsbW homolog (122 aa)
 
     
  0.766
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3’ to 5’ and 5’ to 3’ exonuclease activity (986 aa)
         
  0.612
sll1620
Hypothetical protein (158 aa)
         
  0.594
sll1228
Hybrid sensory kinase Hik4 (633 aa)
           
  0.567
slr1660
Hypothetical protein (192 aa)
           
  0.565
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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