STRINGSTRING
sll0847 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0847" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0847Hypothetical protein (201 aa)    
Predicted Functional Partners:
sll1477
Hypothetical protein (832 aa)
   
          0.721
slr1529
Nitrogen assimilation regulatory protein NtrX (835 aa)
   
          0.703
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (By similarity) (447 aa)
              0.679
purT
Glycinamide ribonucleotide transformylase; Catalyzes two reactions- the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP (391 aa)
              0.661
slr1567
Hypothetical protein (765 aa)
   
          0.618
slr0144
Hypothetical protein (262 aa)
   
          0.560
slr1959
Hypothetical protein (827 aa)
   
          0.549
slr1770
Hypothetical protein (111 aa)
   
          0.531
sll0068
Hypothetical protein (1239 aa)
   
          0.515
slr0592
Hypothetical protein (491 aa)
   
          0.499
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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