STRINGSTRING
slr0872 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0872" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0872Hypothetical protein (372 aa)    
Predicted Functional Partners:
sll0328
Hypothetical protein (139 aa)
           
  0.922
slr1968
Hypothetical protein (934 aa)
           
  0.922
slr2123
D-isomer specific 2-hydroxyacid dehydrogenase family protein (318 aa)
           
  0.922
slr1841
Hypothetical protein (630 aa)
   
     
  0.910
sll0721
Hypothetical protein (1290 aa)
           
  0.826
slr0250
Hypothetical protein (178 aa)
   
 
      0.810
slr1923
Hypothetical protein (398 aa)
   
     
  0.794
slr1218
Hypothetical protein (158 aa)
   
          0.778
sll0470
Hypothetical protein (186 aa)
   
          0.775
sll1757
Hypothetical protein (292 aa)
   
          0.774
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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