STRINGSTRING
slr1246 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1246" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1246Transposase (178 aa)    
Predicted Functional Partners:
ssr2078
Transposase (86 aa)
          0.864
sll0666
Transposase (139 aa)
   
          0.778
ssl1922
Transposase (83 aa)
   
          0.778
ssl0296
Transposase (84 aa)
   
          0.777
ssr0256
Transposase (84 aa)
   
          0.777
ssr2898
Transposase (68 aa)
   
          0.777
slr0511
Transposase (259 aa)
   
          0.769
slr0799
Transposase (107 aa)
 
          0.737
sll1861
Transposase (254 aa)
   
          0.735
slr0166
Transposase (100 aa)
   
          0.720
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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