STRINGSTRING
ssr2087 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssr2087" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr2087Hypothetical protein (84 aa)    
Predicted Functional Partners:
ssl1911
Hypothetical protein (65 aa)
   
          0.775
sll1832
Hypothetical protein (152 aa)
   
          0.775
sll1155
Hypothetical protein (113 aa)
   
          0.772
sll0325
Hypothetical protein (496 aa)
   
          0.771
ssr2554
Hypothetical protein (88 aa)
   
          0.771
ssr2806
Hypothetical protein (59 aa)
   
          0.768
slr1721
Hypothetical protein (492 aa)
   
          0.757
slr1276
Hypothetical protein (275 aa)
   
          0.755
slr1263
Hypothetical protein (470 aa)
   
          0.747
sll0269
Hypothetical protein (137 aa)
   
          0.742
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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