STRINGSTRING
sll1960 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1960" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1960Hypothetical protein (140 aa)    
Predicted Functional Partners:
sll1958
Histidinol phosphate aminotransferase (349 aa)
 
          0.782
sll0691
Hypothetical protein (200 aa)
   
          0.767
ssr2806
Hypothetical protein (59 aa)
   
          0.765
slr0455
Hypothetical protein (141 aa)
   
          0.757
slr1362
Hypothetical protein (133 aa)
   
          0.750
slr1579
Hypothetical protein (562 aa)
   
          0.749
SYNGTS_1284
Probable inositol monophosphatase (267 aa)
              0.738
ssl1047
Hypothetical protein (64 aa)
   
          0.734
slr0420
Hypothetical protein (227 aa)
   
          0.717
slr1110
Hypothetical protein (192 aa)
   
          0.662
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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