STRINGSTRING
serA protein (Synechocystis sp. PCC6803) - STRING interaction network
"serA" - Phosphoglycerate dehydrogenase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serAPhosphoglycerate dehydrogenase (554 aa)    
Predicted Functional Partners:
slr1840
Hypothetical protein (371 aa)
         
  0.967
sll1559
Soluble hydrogenase 42 kDa subunit (384 aa)
 
 
  0.922
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (532 aa)
   
 
  0.916
gpmB
Phosphoglycerate mutase (443 aa)
   
 
  0.910
sll0395
Hypothetical protein (212 aa)
   
 
  0.910
slr1748
Hypothetical protein (214 aa)
   
 
  0.910
gap2
Glyceraldehyde-3-phosphate dehydrogenase (NADP+)(phosphorylating); Involved in the photosynthetic carbon assimilation. Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phos [...] (337 aa)
   
  0.837
slr2123
D-isomer specific 2-hydroxyacid dehydrogenase family protein (318 aa)
   
   
 
0.836
pyk2
Pyruvate kinase (591 aa)
   
 
  0.834
gcvT
Glycine cleavage system aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine (372 aa)
   
  0.760
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (2%) [HD]