STRINGSTRING
slr1990 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1990" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1990Hypothetical protein (240 aa)    
Predicted Functional Partners:
SYNGTS_1304
Adenylate cyclase (337 aa)
              0.793
sll1340
Hypothetical protein (100 aa)
   
          0.778
ssl0105
Hypothetical protein (88 aa)
   
          0.777
slr1122
Hypothetical protein (250 aa)
   
          0.777
rpoZ
Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity) (76 aa)
   
          0.773
sll1071
Hypothetical protein (275 aa)
   
          0.773
rpmF
50S ribosomal protein L32 (57 aa)
   
          0.766
sll1979
Hypothetical protein (142 aa)
   
          0.760
sll1586
Hypothetical protein (1749 aa)
   
          0.759
SYNGTS_0373
High light inducible protein (57 aa)
   
          0.758
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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