STRINGSTRING
slr2000 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2000" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2000Hypothetical protein (321 aa)    
Predicted Functional Partners:
slr0483
Hypothetical protein (149 aa)
   
          0.778
slr1288
Hypothetical protein (194 aa)
   
        0.777
slr0975
Hypothetical protein (285 aa)
   
          0.777
ssl0352
Hypothetical protein (58 aa)
   
          0.776
slr1644
Hypothetical protein (290 aa)
   
          0.776
sll0269
Hypothetical protein (137 aa)
   
          0.774
ssl3364
Hypothetical protein (74 aa)
   
          0.772
sll1751
Hypothetical protein (111 aa)
   
          0.772
ssr1391
Hypothetical protein (93 aa)
   
          0.770
slr1918
Hypothetical protein (228 aa)
   
          0.770
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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