STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pma1Cation-transporting ATPase; Could mediate calcium influx. (905 aa)    
Predicted Functional Partners:
slr1507
ORF_ID:slr1507; unknown protein.
   
  
 0.832
sll0615
Transmembrane protein FT27; ORF_ID:sll0615.
    
 
 0.739
slr1595
Na/H antiporter; Na(+)/H(+) antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.706
slr1257
ORF_ID:slr1257; unknown protein.
   
  
 0.679
sll0273
Na+/H+ exchanger; Required for Na(+) uptake into the cell, especially at low external Na(+) concentrations or low Na(+)/K(+) ratios. May be part of a sodium cycle that permits re-entry of sodium into the cell.
    
 
 0.627
napA
Na(+)/H(+) antiporter; Na(+)/H(+) antiporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.614
thdF
Thiophen and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.552
mgtC
Mg2+ transport ATPase; ORF_ID:slr0014.
  
 
 0.493
sll0556
ORF_ID:sll0556; unknown protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
 
 0.467
slr1727
Eukaryotic Na+/H+ exchanger; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons. Might be able to function at relatively high concentrations of Na(+) ions. Has also Li(+)/H(+) antiport activity under K(+)-rich conditions, but it might not have any physiological relevance.
    
 
 0.466
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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