STRINGSTRING
ssl3127 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssl3127" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssl3127Hypothetical protein (75 aa)    
Predicted Functional Partners:
natD
Neutral amino acid transport system permease protein NatD (286 aa)
 
 
  0.991
natA
Conserved component of ABC transporter for natural amino acids (267 aa)
 
 
  0.990
natB
Periplasmic binding protein of ABC transporter for natural amino acids (454 aa)
 
 
  0.990
livF
High-affinity branched-chain amino acid transport ATP-binding protein BraG (240 aa)
 
 
  0.986
SYNGTS_0807
Urea transport system permease protein (388 aa)
   
 
  0.908
urtE
Urea transport system ATP-binding protein (249 aa)
   
 
  0.870
glnP
ABC-type transporter protein (530 aa)
       
  0.853
sll0606
Hypothetical protein (476 aa)
   
 
  0.841
amiC
Negative aliphatic amidase regulator (446 aa)
   
 
  0.805
sll0146
High-affinity branched-chain amino acid transport protein BraE (372 aa)
   
   
 
0.802
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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