STRINGSTRING
slr0270 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0270" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0270Hypothetical protein (106 aa)    
Predicted Functional Partners:
slr0271
Hypothetical protein (172 aa)
           
  0.940
cysR
Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex (205 aa)
           
  0.937
sll0640
Sulfur deprivation response regulator (612 aa)
           
  0.890
slr0269
Hypothetical protein (199 aa)
 
          0.886
sll0396
OmpR subfamily protein Rre28 (224 aa)
           
  0.826
sll1155
Hypothetical protein (113 aa)
 
          0.779
slr0613
Hypothetical protein (173 aa)
   
          0.778
slr1583
Hypothetical protein (120 aa)
   
          0.777
kaiA
Circadian clock protein KaiA; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of KaiC. In contrast, the presence of KaiB in the complex decreases the phosphorylation status of KaiC, suggesting that KaiB acts by antagonizing the interaction between KaiA and KaiC. A KaiA dimer is sufficient to enhance KaiC he [...] (299 aa)
   
          0.774
slr1206
Hypothetical protein (211 aa)
   
          0.770
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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