STRINGSTRING
ssl0452 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssl0452" - Phycobilisome degradation protein NblA in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssl0452Phycobilisome degradation protein NblA (62 aa)    
Predicted Functional Partners:
ssl0453
Phycobilisome degradation protein NblA (60 aa)
     
 
  0.968
slr0271
Hypothetical protein (172 aa)
           
  0.712
slr0270
Hypothetical protein (106 aa)
           
  0.712
sll0396
OmpR subfamily protein Rre28 (224 aa)
           
  0.627
slr0222
Hybrid sensory kinase Hik25/GidA (1178 aa)
           
  0.539
sigC
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (404 aa)
           
  0.536
htpG
Heat shock protein; Molecular chaperone. Has ATPase activity (658 aa)
           
  0.521
sll0789
OmpR subfamily protein Rre34/CopR (232 aa)
           
  0.521
sodB
Superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems (199 aa)
           
  0.521
cpcA
Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex (162 aa)
           
  0.521
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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