STRINGSTRING
slr0271 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0271" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0271Hypothetical protein (172 aa)    
Predicted Functional Partners:
slr0270
Hypothetical protein (106 aa)
           
  0.940
cysR
Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex (205 aa)
           
  0.937
sll0640
Sulfur deprivation response regulator (612 aa)
           
  0.890
sll0396
OmpR subfamily protein Rre28 (224 aa)
           
  0.826
ssl0452
Phycobilisome degradation protein NblA (62 aa)
           
  0.712
ssl0453
Phycobilisome degradation protein NblA (60 aa)
           
  0.712
slr0272
Hypothetical protein (325 aa)
              0.566
slr0273
Hypothetical protein (316 aa)
              0.481
ntcA
Global nitrogen regulator; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control (225 aa)
           
  0.414
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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