STRINGSTRING
shc protein (Synechocystis sp. PCC6803) - STRING interaction network
"shc" - Squalene-hopene-cyclase in Synechocystis sp. PCC6803
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shcSqualene-hopene-cyclase (647 aa)    
Predicted Functional Partners:
sll0513
Hypothetical protein (277 aa)
 
 
  0.985
slr1566
Hypothetical protein (395 aa)
 
      0.868
slr1507
Hypothetical protein (360 aa)
 
          0.862
dfrA
Dihydroflavonol 4-reductase (335 aa)
 
          0.850
erg6
Methyltransferase (294 aa)
     
 
  0.778
sll0418
sterol-C-methyltransferase; Involved in a key methylation step in both tocopherol (vitamin E) and plastoquinone synthesis. Catalyzes the conversion of 2-methyl-6-phytyl-1,4-hydroquinol (MPBQ) to 2,3-dimethyl-6- phytyl-1,4-hydroquinol (DMPQ, a substrate for tocopherol cyclase), and 2-methyl-6-solanyl-1,4-benzoquinol (MSBQ) to plastoquinol (318 aa)
     
 
  0.777
crtE
Geranylgeranyl pyrophosphate synthase (302 aa)
 
 
  0.717
crtB
Phytoene synthase; Involved in the biosynthesis of carotenoids. Catalyzes the condensation of two molecules of geranylgeranyl diphosphate (GGPP) to give prephytoene diphosphate (PPPP) and the subsequent rearrangement of the cyclopropylcarbinyl intermediate to yield all-trans phytoene (309 aa)
   
   
  0.702
slr1977
Hypothetical protein (244 aa)
   
          0.676
slr0813
Glycosyltransferase family II protein (389 aa)
 
     
  0.669
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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