STRINGSTRING
slr2100 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2100" - Regulatory component of sensory transduction system Rre20 in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2100Regulatory component of sensory transduction system Rre20 (368 aa)    
Predicted Functional Partners:
slr1143
Hypothetical protein (343 aa)
   
  0.873
slr1166
Hypothetical protein (354 aa)
     
   
  0.822
cph2
Hypothetical protein; Photoreceptor which exists in two forms that are reversibly interconvertible by light- the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region (1276 aa)
 
   
  0.804
slr0842
Hypothetical protein (404 aa)
 
   
  0.761
slr2098
Hybrid sensory kinase Hik21 (1261 aa)
 
 
0.758
slr1885
Hypothetical protein (192 aa)
         
  0.732
slr1657
Hypothetical protein (275 aa)
 
          0.731
sll0779
PleD gene product homolog (884 aa)
   
  0.720
slr0104
Hypothetical protein (811 aa)
           
  0.719
slr0510
Hypothetical protein (505 aa)
           
  0.712
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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