STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2100Regulatory components of sensory transduction system; ORF_ID:slr2100. (368 aa)    
Predicted Functional Partners:
slr0842
ORF_ID:slr0842; hypothetical protein.
 
 0.990
slr1575
ORF_ID:slr1575; hypothetical protein.
   
 
 0.980
slr0593
cAMP protein kinase regulatory chain; ORF_ID:slr0593.
   
 
 0.975
pleD-2
PleD gene product; ORF_ID:slr0687.
  
 0.957
pleD-3
PleD; ORF_ID:slr1047.
  
 0.950
slr1657
PleD gene product; ORF_ID:slr1657.
 
    0.950
slr1760
Regulatory components of sensory transduction system; ORF_ID:slr1760.
  
0.940
pleD
PleD gene product; ORF_ID:slr1798.
 
    0.931
slr0210
Sensory transduction histidine kinase; ORF_ID:slr0210.
 
 0.931
sll0779
ORF_ID:sll0779; PleD gene product homologue.
 
 0.912
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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