STRINGSTRING
slr1522 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1522" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1522Transposase (358 aa)    
Predicted Functional Partners:
sll1715
Hypothetical protein (157 aa)
   
          0.639
slr2036
Transposase (338 aa)
   
          0.604
sll1255
Transposase (338 aa)
   
          0.603
slr0180
Transposase (338 aa)
   
          0.601
SYNGTS_1873
No annotation available (338 aa)
   
          0.601
sll1560
Transposase (338 aa)
   
          0.597
sll0198
Hypothetical protein (191 aa)
   
          0.580
sll1999
Transposase (172 aa)
   
          0.517
hflX
GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis (534 aa)
              0.516
slr1523
Transposase (219 aa)
              0.483
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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