STRINGSTRING
kpsM protein (Synechocystis sp. PCC6803) - STRING interaction network
"kpsM" - Probable polysaccharide ABC transporter permease protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kpsMProbable polysaccharide ABC transporter permease protein (302 aa)    
Predicted Functional Partners:
kpsT
Probable polysaccharide ABC transporter ATP-binding protein (371 aa)
 
  0.999
SYNGTS_0324
ABC transporter (430 aa)
 
  0.998
SYNGTS_3144
ATP-binding protein (254 aa)
 
  0.994
ssr2802
ABC transporter (53 aa)
 
  0.927
mtfB
Mannosyltransferase (399 aa)
 
   
  0.894
sll0574
Probable lipopolysaccharide ABC transporter permease protein (271 aa)
   
   
0.860
slr0977
ABC transporter (276 aa)
   
   
 
0.854
lmbP
LmbP protein (326 aa)
         
  0.835
sll1528
Hypothetical protein (996 aa)
   
   
  0.795
gumB
GumB protein (504 aa)
   
   
  0.790
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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