STRINGSTRING
sll1999 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1999" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1999Transposase (172 aa)    
Predicted Functional Partners:
sll1998
Transposase (282 aa)
              0.634
sll1571
Hypothetical protein (313 aa)
   
          0.596
slr2119
Hypothetical protein (278 aa)
 
          0.570
slr0460
Transposase (157 aa)
   
          0.547
sll1982
Transposase (237 aa)
   
          0.521
sll1997
Transposase (155 aa)
            0.519
slr1522
Transposase (358 aa)
   
          0.517
sll0092
Transposase (228 aa)
   
          0.495
slr0099
Transposase (339 aa)
   
          0.492
sll0667
Transposase (219 aa)
   
          0.462
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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