STRINGSTRING
sll1997 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1997" - Transposase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1997Transposase (155 aa)    
Predicted Functional Partners:
sll1998
Transposase (282 aa)
              0.674
slr2111
Hypothetical protein (157 aa)
              0.561
slr2110
Hypothetical protein (113 aa)
              0.561
sll1999
Transposase (172 aa)
            0.519
spsC
Spore coat polysaccharide biosynthesis protein (345 aa)
              0.435
SYNGTS_1474
No annotation available (164 aa)
              0.435
slr2112
Transposase (119 aa)
              0.435
spsA
Spore coat polysaccharide biosynthesis protein (276 aa)
              0.407
slr2115
Hypothetical protein (522 aa)
              0.407
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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