STRINGSTRING
spsA protein (Synechocystis sp. PCC6803) - STRING interaction network
"spsA" - Spore coat polysaccharide biosynthesis protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spsASpore coat polysaccharide biosynthesis protein (276 aa)    
Predicted Functional Partners:
sps
Sucrose phosphate synthase (720 aa)
   
 
  0.915
spsC
Spore coat polysaccharide biosynthesis protein (345 aa)
   
   
  0.901
slr2111
Hypothetical protein (157 aa)
   
   
  0.881
fcl
Hypothetical protein; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (312 aa)
 
 
  0.867
slr2115
Hypothetical protein (522 aa)
              0.859
slr2117
Hypothetical protein (181 aa)
 
          0.831
slr0820
Glucosyltransferase (478 aa)
   
  0.819
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
 
  0.819
SYNGTS_1536
dTDP-glucose 4-6-dehydratase (309 aa)
   
 
  0.810
rfbG
CDP-glucose-4,6-dehydratase (360 aa)
   
 
  0.809
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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