STRINGSTRING
slr2120 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr2120" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2120Hypothetical protein (330 aa)    
Predicted Functional Partners:
slr2122
Hypothetical protein (225 aa)
 
          0.958
slr2125
Hypothetical protein (264 aa)
 
          0.943
slr2123
D-isomer specific 2-hydroxyacid dehydrogenase family protein (318 aa)
 
          0.912
slr2124
Short-chain alcohol dehydrogenase family protein (249 aa)
 
          0.911
slr2119
Hypothetical protein (278 aa)
 
          0.893
slr2121
Hypothetical protein (215 aa)
 
          0.885
slr2117
Hypothetical protein (181 aa)
 
          0.858
slr1065
Hypothetical protein (356 aa)
   
     
  0.754
sll1664
Hypothetical protein (312 aa)
   
          0.722
slr2118
Hypothetical protein (421 aa)
              0.695
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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