Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fabD | fabF | gene:10498132 | gene:10498174 | Malonyl coenzyme A-acyl carrier protein transacylase; ORF_ID:slr2023; gene:fabD or tfpA; Belongs to the FabD family. | Beta ketoacyl-acyl carrier protein synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
fabD | fabH | gene:10498132 | gene:10498888 | Malonyl coenzyme A-acyl carrier protein transacylase; ORF_ID:slr2023; gene:fabD or tfpA; Belongs to the FabD family. | Beta-ketoacyl-acyl carrier protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.999 |
fabD | slr1322 | gene:10498132 | gene:10498944 | Malonyl coenzyme A-acyl carrier protein transacylase; ORF_ID:slr2023; gene:fabD or tfpA; Belongs to the FabD family. | Metalloprotease slr1322; Probable metalloprotease. | 0.680 |
fabF | fabD | gene:10498174 | gene:10498132 | Beta ketoacyl-acyl carrier protein synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Malonyl coenzyme A-acyl carrier protein transacylase; ORF_ID:slr2023; gene:fabD or tfpA; Belongs to the FabD family. | 0.999 |
fabF | fabH | gene:10498174 | gene:10498888 | Beta ketoacyl-acyl carrier protein synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Beta-ketoacyl-acyl carrier protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.999 |
fabF | slr1322 | gene:10498174 | gene:10498944 | Beta ketoacyl-acyl carrier protein synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Metalloprotease slr1322; Probable metalloprotease. | 0.680 |
fabH | fabD | gene:10498888 | gene:10498132 | Beta-ketoacyl-acyl carrier protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | Malonyl coenzyme A-acyl carrier protein transacylase; ORF_ID:slr2023; gene:fabD or tfpA; Belongs to the FabD family. | 0.999 |
fabH | fabF | gene:10498888 | gene:10498174 | Beta-ketoacyl-acyl carrier protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | Beta ketoacyl-acyl carrier protein synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
fabH | slr1322 | gene:10498888 | gene:10498944 | Beta-ketoacyl-acyl carrier protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | Metalloprotease slr1322; Probable metalloprotease. | 0.680 |
sll0887 | slr1322 | gene:10499944 | gene:10498944 | ORF_ID:sll0887; unknown protein. | Metalloprotease slr1322; Probable metalloprotease. | 0.805 |
slr1322 | fabD | gene:10498944 | gene:10498132 | Metalloprotease slr1322; Probable metalloprotease. | Malonyl coenzyme A-acyl carrier protein transacylase; ORF_ID:slr2023; gene:fabD or tfpA; Belongs to the FabD family. | 0.680 |
slr1322 | fabF | gene:10498944 | gene:10498174 | Metalloprotease slr1322; Probable metalloprotease. | Beta ketoacyl-acyl carrier protein synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.680 |
slr1322 | fabH | gene:10498944 | gene:10498888 | Metalloprotease slr1322; Probable metalloprotease. | Beta-ketoacyl-acyl carrier protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.680 |
slr1322 | sll0887 | gene:10498944 | gene:10499944 | Metalloprotease slr1322; Probable metalloprotease. | ORF_ID:sll0887; unknown protein. | 0.805 |