STRINGSTRING
hoxH protein (Synechocystis sp. PCC6803) - STRING interaction network
"hoxH" - Hydrogenase large subunit in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxHHydrogenase large subunit (474 aa)    
Predicted Functional Partners:
hoxY
Hydrogenase small subunit (182 aa)
 
 
 
  0.999
hoxU
Bidirectional hydrogenase complex protein HoxU (238 aa)
 
     
  0.980
slr1876
Hypothetical protein (157 aa)
 
     
  0.968
hoxF
Hydrogenase subunit (533 aa)
         
  0.967
nifJ
Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1199 aa)
         
  0.918
slr1923
Hypothetical protein (398 aa)
 
 
 
  0.899
sll1225
Hypothetical protein (149 aa)
         
  0.898
ssl2420
Hypothetical protein (84 aa)
         
  0.897
sll1432
Hydrogenase isoenzymes formation protein HypB; Could be involved in nickel binding and accumulation (285 aa)
 
     
  0.845
sll1222
Hypothetical protein (212 aa)
         
  0.840
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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