STRINGSTRING
lnt protein (Synechocystis sp. PCC6803) - STRING interaction network
"lnt" - Apolipoprotein N-acyltransferase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lntApolipoprotein N-acyltransferase; Transfers the fatty acyl group on membrane lipoproteins (519 aa)    
Predicted Functional Partners:
ssr1391
Hypothetical protein (93 aa)
              0.859
slr0104
Hypothetical protein (811 aa)
         
  0.793
dnaK3
DnaK protein; Acts as a chaperone (771 aa)
           
  0.674
dnaK1
DnaK protein; Acts as a chaperone (692 aa)
           
  0.673
dnaK2
DnaK protein; Acts as a chaperone (636 aa)
           
  0.672
slr0086
Hypothetical protein (531 aa)
   
     
  0.640
slr0820
Glucosyltransferase (478 aa)
              0.628
slr1799
Hypothetical protein (637 aa)
   
          0.609
slr0427
Hypothetical protein (416 aa)
              0.608
slr0678
Hypothetical protein (269 aa)
   
   
  0.607
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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