Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
guaA | sll1254 | gene:10499709 | gene:10499029 | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | Hemolysin; ORF_ID:sll1254. | 0.435 |
sll0168 | sll1254 | gene:10499553 | gene:10499029 | ORF_ID:sll0168; hypothetical protein. | Hemolysin; ORF_ID:sll1254. | 0.979 |
sll0168 | sll1524 | gene:10499553 | gene:10499337 | ORF_ID:sll0168; hypothetical protein. | ORF_ID:sll1524; hypothetical protein. | 0.979 |
sll1254 | guaA | gene:10499029 | gene:10499709 | Hemolysin; ORF_ID:sll1254. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.435 |
sll1254 | sll0168 | gene:10499029 | gene:10499553 | Hemolysin; ORF_ID:sll1254. | ORF_ID:sll0168; hypothetical protein. | 0.979 |
sll1254 | sll1255 | gene:10499029 | gene:10499028 | Hemolysin; ORF_ID:sll1254. | Transposase; ORF_ID:sll1255. | 0.487 |
sll1254 | sll1524 | gene:10499029 | gene:10499337 | Hemolysin; ORF_ID:sll1254. | ORF_ID:sll1524; hypothetical protein. | 0.979 |
sll1254 | slr0053 | gene:10499029 | gene:10499777 | Hemolysin; ORF_ID:sll1254. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.429 |
sll1254 | slr1342 | gene:10499029 | gene:10499030 | Hemolysin; ORF_ID:sll1254. | ORF_ID:slr1342; unknown protein. | 0.543 |
sll1254 | ssr1853 | gene:10499029 | gene:10497496 | Hemolysin; ORF_ID:sll1254. | ORF_ID:ssr1853; unknown protein. | 0.408 |
sll1255 | sll1254 | gene:10499028 | gene:10499029 | Transposase; ORF_ID:sll1255. | Hemolysin; ORF_ID:sll1254. | 0.487 |
sll1524 | sll0168 | gene:10499337 | gene:10499553 | ORF_ID:sll1524; hypothetical protein. | ORF_ID:sll0168; hypothetical protein. | 0.979 |
sll1524 | sll1254 | gene:10499337 | gene:10499029 | ORF_ID:sll1524; hypothetical protein. | Hemolysin; ORF_ID:sll1254. | 0.979 |
slr0053 | sll1254 | gene:10499777 | gene:10499029 | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Hemolysin; ORF_ID:sll1254. | 0.429 |
slr1342 | sll1254 | gene:10499030 | gene:10499029 | ORF_ID:slr1342; unknown protein. | Hemolysin; ORF_ID:sll1254. | 0.543 |
ssr1853 | sll1254 | gene:10497496 | gene:10499029 | ORF_ID:ssr1853; unknown protein. | Hemolysin; ORF_ID:sll1254. | 0.408 |