STRINGSTRING
slr1980 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1980" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1980Hypothetical protein (297 aa)    
Predicted Functional Partners:
trpE2
Anthranilate synthase component I (485 aa)
              0.859
slr1978
Hypothetical protein (291 aa)
              0.859
slr1977
Hypothetical protein (244 aa)
              0.644
sll1461
Hypothetical protein (220 aa)
   
          0.638
slr1095
Hypothetical protein (215 aa)
   
          0.638
sll0995
Hypothetical protein (231 aa)
   
          0.600
sll0068
Hypothetical protein (1239 aa)
   
          0.579
sll1879
Two-component response regulator Rre23 (562 aa)
 
          0.574
ssr2708
Hypothetical protein (53 aa)
   
          0.554
slr1456
Type 4 pilin-like protein (175 aa)
   
          0.551
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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