STRINGSTRING
lytR protein (Synechocystis sp. PCC6803) - STRING interaction network
"lytR" - Membrane bound protein LytR in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytRMembrane bound protein LytR (463 aa)    
Predicted Functional Partners:
slr0688
Hypothetical protein (343 aa)
 
          0.755
slr1908
Hypothetical protein (591 aa)
   
          0.710
sll1550
Hypothetical protein (544 aa)
   
          0.704
slr1841
Hypothetical protein (630 aa)
   
          0.704
sll0192
Hypothetical protein (423 aa)
   
          0.689
sll1271
Hypothetical protein (572 aa)
   
          0.649
slr0280
Hypothetical protein (610 aa)
   
          0.613
sll0154
Hypothetical 35.6 kD protein; Required for morphogenesis under gluconeogenic growth conditions (462 aa)
   
          0.600
sll0931
Hypothetical protein (156 aa)
   
          0.600
sll1873
Hypothetical protein (121 aa)
              0.596
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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