STRINGSTRING
SYNGTS_1673 protein (Synechocystis sp. PCC6803) - STRING interaction network
"SYNGTS_1673" - Ferredoxin in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_1673Ferredoxin (122 aa)    
Predicted Functional Partners:
petH
ferredoxin-NADP oxidoreductase; Essential for growth (413 aa)
   
 
  0.938
gltD
NADH-glutamate synthase small subunit (494 aa)
     
  0.937
SYNGTS_2145
NifS protein (386 aa)
   
  0.884
SYNGTS_0100
NifS protein (391 aa)
   
  0.884
petE
Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I (126 aa)
     
   
  0.855
cyp120
Cytochrome P450 (444 aa)
     
  0.826
SYNGTS_1224
No annotation available (352 aa)
           
  0.790
psbD
Photosystem II D2 protein; Photosystem II (PSII) is a light-driven water- plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex (352 aa)
           
  0.749
petJ
Cytochrome c553; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis (120 aa)
         
  0.736
petB
Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (222 aa)
       
  0.735
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (13%) [HD]