STRINGSTRING
sll1178 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll1178" - Nodulation protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1178Nodulation protein (615 aa)    
Predicted Functional Partners:
slr0345
Hypothetical protein (135 aa)
 
          0.862
slr0386
Hypothetical protein (412 aa)
 
          0.629
ftsW
Rod-shape-determining protein; Essential cell division protein. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane (By similarity) (393 aa)
              0.622
slr1266
Hypothetical protein (185 aa)
              0.622
ggt
Gamma-glutamyltranspeptidase (518 aa)
              0.563
SYNGTS_2586
Imidazoleglycerol-phosphate dehydratase (161 aa)
 
          0.489
slr0606
Hypothetical protein (317 aa)
   
        0.414
slr1270
Hypothetical protein (526 aa)
              0.408
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate (194 aa)
              0.406
SYNGTS_1536
dTDP-glucose 4-6-dehydratase (309 aa)
              0.406
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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