STRINGSTRING
slr1275 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1275" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1275Hypothetical protein (284 aa)    
Predicted Functional Partners:
slr1276
Hypothetical protein (275 aa)
 
     
  0.995
slr1704
Hypothetical protein (274 aa)
   
     
  0.917
pilM
Membrane protein (367 aa)
 
   
  0.903
slr0197
Competence protein ComA (553 aa)
         
  0.891
slr0695
Hypothetical protein (173 aa)
   
     
  0.873
gspD
General secretion pathway protein D (785 aa)
 
   
  0.869
slr1272
Hypothetical protein (254 aa)
         
  0.835
sll1940
Hypothetical protein (157 aa)
   
     
  0.804
sll0325
Hypothetical protein (496 aa)
   
          0.777
sll0944
Hypothetical protein (164 aa)
   
          0.776
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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