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desB protein (Synechocystis sp. PCC6803) - STRING interaction network
"desB" - Delta 15 desaturase in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
desBDelta 15 desaturase (359 aa)    
Predicted Functional Partners:
des6
Delta-6 desaturase (359 aa)
 
     
  0.927
desC(des9)
Delta-9 desaturase (318 aa)
 
   
  0.837
petB
Cytochrome b6; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions (222 aa)
         
  0.676
cydB
Cytochrome oxidase d subunit II (336 aa)
       
    0.569
cydA
Cytochrome oxidase d subunit I (483 aa)
       
    0.569
slr1674
Hypothetical protein (116 aa)
   
     
  0.542
slr1285
Sensory transduction histidine kinase Hik34 (464 aa)
           
  0.540
htpG
Heat shock protein; Molecular chaperone. Has ATPase activity (658 aa)
           
  0.536
sll1752
Hypothetical protein (240 aa)
     
   
  0.530
slr2060
Hypothetical protein (465 aa)
           
  0.521
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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