STRINGSTRING
slr1673 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1673" - rRNA methylase in Synechocystis sp. PCC6803
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1673rRNA methylase (274 aa)    
Predicted Functional Partners:
slr1670
Hypothetical protein (885 aa)
         
  0.918
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate (495 aa)
         
  0.903
slr1674
Hypothetical protein (116 aa)
         
  0.792
zam
Protein conferring resistance to acetazolamide; Not known; control resistance to the carbonic anhydrase inhibitor acetazolamide (781 aa)
 
      0.756
slr0529
Hypothetical protein (421 aa)
           
  0.752
cysE
Serine acetyltransferase (249 aa)
   
        0.734
sll0556
Hypothetical protein (631 aa)
         
  0.714
ggtA
ATP-binding subunit of an ABC-type osmolyte transporter (363 aa)
           
  0.714
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (452 aa)
 
   
  0.713
sll1290
Ribonuclease II (666 aa)
 
      0.710
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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