STRINGSTRING
slr0948 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0948" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0948Hypothetical protein (215 aa)    
Predicted Functional Partners:
sll0914
Hypothetical protein (376 aa)
         
  0.949
slr0947
OmpR subfamily protein Ycf27/Rre26 (234 aa)
         
  0.925
thf1
Hypothetical protein; May be involved in photosynthetic membrane biogenesis (240 aa)
   
        0.799
slr1702
Hypothetical protein (251 aa)
   
        0.784
slr1195
Hypothetical protein (154 aa)
   
        0.780
sll2002
Hypothetical protein (292 aa)
   
        0.779
slr0483
Hypothetical protein (149 aa)
   
        0.777
slr0598
Hypothetical protein (102 aa)
   
          0.777
sll0169
Hypothetical protein (714 aa)
   
        0.775
slr1796
Hypothetical protein (201 aa)
   
          0.774
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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