STRINGSTRING
ssr1600 protein (Synechocystis sp. PCC6803) - STRING interaction network
"ssr1600" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssr1600Hypothetical protein (70 aa)    
Predicted Functional Partners:
sll1926
Hypothetical protein (145 aa)
 
          0.749
ssr1513
Hypothetical protein (65 aa)
   
          0.723
mrnC
Hypothetical protein; Involved in correct processing of both the 5’ and 3’ ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors (143 aa)
              0.712
slr0955
Hypothetical protein (384 aa)
              0.700
ssr0109
Hypothetical protein (62 aa)
   
          0.686
rpmC
50S ribosomal protein L29 (73 aa)
   
          0.682
sll0424
Hypothetical protein (534 aa)
   
          0.664
sll0909
Hypothetical protein (228 aa)
 
          0.654
sll1084
Hypothetical protein (865 aa)
   
          0.647
slr0292
Hypothetical protein (249 aa)
   
          0.586
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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