STRINGSTRING
slr1624 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1624" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1624Hypothetical protein (458 aa)    
Predicted Functional Partners:
slr0729
Hypothetical protein (101 aa)
   
          0.774
sll0372
Hypothetical protein (198 aa)
   
          0.769
ssr1155
Hypothetical protein (67 aa)
   
          0.768
ftrV
Ferredoxin thioredoxin reductase variable chain; Variable subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin (75 aa)
   
          0.764
pcxA
Proton extrusion protein PcxA; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport (440 aa)
   
          0.761
slr1218
Hypothetical protein (158 aa)
   
          0.759
ssl2069
Hypothetical protein (83 aa)
   
          0.759
slr0013
Hypothetical protein (175 aa)
   
          0.745
slr1276
Hypothetical protein (275 aa)
   
          0.744
slr0872
Hypothetical protein (372 aa)
   
          0.742
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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