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SYNGTS_1869 protein (Synechocystis sp. PCC6803) - STRING interaction network
"SYNGTS_1869" - Twitching mobility protein in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_1869Twitching mobility protein (428 aa)    
Predicted Functional Partners:
gspF
Pilin biogenesis protein (404 aa)
 
   
  0.977
hofD
Type 4 prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (269 aa)
 
   
  0.907
SYNGTS_2589
General secretion pathway protein E (813 aa)
 
   
  0.896
pilM
Membrane protein (367 aa)
 
   
  0.865
sll1534
Hypothetical protein (378 aa)
              0.859
gspD
General secretion pathway protein D (785 aa)
 
   
  0.813
tadA
Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (164 aa)
         
  0.811
SYNGTS_2367
Probable transcription regulator (133 aa)
           
  0.725
SYNGTS_0436
Virulence associated protein C (83 aa)
           
  0.725
SYNGTS_2329
General secretion pathway protein E (672 aa)
 
   
0.657
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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