STRINGSTRING
des6 protein (Synechocystis sp. PCC6803) - STRING interaction network
"des6" - Delta-6 desaturase in Synechocystis sp. PCC6803
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
des6Delta-6 desaturase (359 aa)    
Predicted Functional Partners:
slr1609
Long-chain-fatty-acid CoA ligase (636 aa)
         
    0.963
desA
Fatty acid desaturase; Can introduce a second cis double bond at the Delta(12) position of fatty acid bound to membranes glycerolipids. This enzyme is involved in chilling tolerance because the phase transition temperature of lipids of cellular membranes depends on the degree of unsaturation of fatty acids of the membrane lipids (351 aa)
   
     
  0.952
desB
Delta 15 desaturase (359 aa)
 
     
  0.927
desC(des9)
Delta-9 desaturase (318 aa)
 
   
  0.846
sll0268
Hypothetical protein (135 aa)
         
  0.755
sll0264
Hypothetical protein (396 aa)
   
        0.703
sll0263
Hypothetical protein (239 aa)
              0.700
sll0265
Hypothetical protein (301 aa)
              0.700
sll0266
Hypothetical protein (412 aa)
              0.700
slr0031
Hypothetical protein (584 aa)
   
     
  0.697
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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