STRINGSTRING
sll0260 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0260" - Hemolysin in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0260Hemolysin (448 aa)    
Predicted Functional Partners:
sll1499
Ferredoxin-dependent glutamate synthase (1556 aa)
   
   
  0.855
gltB
Ferredoxin-dependent glutamate synthase (1550 aa)
   
   
  0.855
dctP
C4-dicarboxylase binding protein (369 aa)
         
  0.760
rpmA
50S ribosomal protein L27 (87 aa)
   
      0.725
metH
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity) (1195 aa)
       
    0.659
fabG2
3-ketoacyl-acyl carrier protein reductase (240 aa)
   
 
    0.629
fabG1
3-oxoacyl-[acyl-carrier protein] reductase (247 aa)
   
 
    0.629
sll1725
ABC transporter (610 aa)
 
   
  0.445
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3’ to 5’ and 5’ to 3’ exonuclease activity (986 aa)
   
   
  0.432
sll1276
ABC transporter (534 aa)
 
   
  0.427
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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