STRINGSTRING
slr0148 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr0148" - Probable ferredoxin in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0148Probable ferredoxin (160 aa)    
Predicted Functional Partners:
slr0144
Hypothetical protein (262 aa)
 
     
  0.983
gltD
NADH-glutamate synthase small subunit (494 aa)
     
  0.937
slr0146
Hypothetical protein (170 aa)
         
  0.937
slr0145
Hypothetical protein (136 aa)
         
  0.928
slr0147
Hypothetical protein (292 aa)
         
  0.922
slr0149
Hypothetical protein (156 aa)
         
  0.920
slr0151
Hypothetical protein (320 aa)
 
     
  0.910
SYNGTS_2145
NifS protein (386 aa)
   
  0.884
SYNGTS_0100
NifS protein (391 aa)
   
  0.884
petH
ferredoxin-NADP oxidoreductase; Essential for growth (413 aa)
     
 
  0.844
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
Server load: low (8%) [HD]