STRINGSTRING
sll0142 protein (Synechocystis sp. PCC6803) - STRING interaction network
"sll0142" - Cation or drug efflux system protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0142Cation or drug efflux system protein (1075 aa)    
Predicted Functional Partners:
sll0141
Hypothetical protein (467 aa)
 
          0.886
sll1053
Hypothetical protein (520 aa)
 
   
  0.763
ank
Erythroid ankyrin (441 aa)
   
      0.750
slr1270
Hypothetical protein (526 aa)
 
  0.705
sll0180
Hypothetical protein (501 aa)
 
   
  0.640
sll1481
ABC-transporter DevB homolog (451 aa)
   
   
  0.499
slr0793
Hypothetical protein (215 aa)
   
   
  0.499
hlyD
Hemolysin secretion protein (583 aa)
   
   
  0.499
slr0895
Hypothetical protein (187 aa)
         
  0.477
sll1286
Hypothetical protein (236 aa)
         
  0.477
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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