STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0142Cation or drug efflux system protein; ORF_ID:sll0142; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1075 aa)    
Predicted Functional Partners:
sll0141
ORF_ID:sll0141; hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.920
slr1864
ORF_ID:slr1864; unknown protein.
 
   
 0.788
sll1053
ORF_ID:sll1053; hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.726
slr0909
ORF_ID:slr0909; unknown protein.
      
 0.677
sll0735
ORF_ID:sll0735; unknown protein; Belongs to the glycosyl hydrolase 57 family.
      
 0.674
sll1273
ORF_ID:sll1273; unknown protein.
      
 0.671
sll0180
ORF_ID:sll0180; unknown protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.588
slr1065
ORF_ID:slr1065; unknown protein.
    
 
 0.551
slr1852
ORF_ID:slr1852; unknown protein.
     
 0.551
slr1028
ORF_ID:slr1028; integrin alpha-subunit domain homologue.
      
 0.549
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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