STRINGSTRING
SYNGTS_1993 protein (Synechocystis sp. PCC6803) - STRING interaction network
"SYNGTS_1993" - Twitching motility protein in Synechocystis sp. PCC6803
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGTS_1993Twitching motility protein (369 aa)    
Predicted Functional Partners:
gspF
Pilin biogenesis protein (404 aa)
 
   
  0.990
hofD
Type 4 prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (269 aa)
 
   
  0.908
pilM
Membrane protein (367 aa)
 
   
  0.873
tadA
Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) (164 aa)
         
  0.852
sll0043
CheA like protein Hik18 (1402 aa)
   
   
  0.797
SYNGTS_2367
Probable transcription regulator (133 aa)
           
  0.753
SYNGTS_0436
Virulence associated protein C (83 aa)
           
  0.753
gspD
General secretion pathway protein D (785 aa)
 
   
  0.749
slr0845
Hypothetical protein (190 aa)
         
  0.682
pilJ
Methyl-accepting chemotaxis protein(MCP) homolog (953 aa)
     
   
  0.677
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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