STRINGSTRING
pepP protein (Synechocystis sp. PCC6803) - STRING interaction network
"pepP" - Aminopeptidase P in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepPAminopeptidase P (441 aa)    
Predicted Functional Partners:
gcvT
Glycine cleavage system aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine (372 aa)
   
  0.755
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 3’ to 5’ and 5’ to 3’ exonuclease activity (986 aa)
   
   
  0.721
aroQ
Carbonic 3-dehydroquinase; Catalyzes a trans-dehydration via an enolate intermediate (152 aa)
 
   
  0.710
thiO/thiG
ThiG protein; Catalyzes the FAD-dependent oxidative deamination of glycine. Is essential for thiamine biosynthesis since the oxidation of glycine catalyzed by ThiO generates the glycine imine intermediate (dehydroglycine) required for the biosynthesis of the thiazole ring of thiamine pyrophosphate (By similarity) (656 aa)
   
    0.705
sll1025
Hypothetical protein (392 aa)
   
    0.704
slr0734
Hypothetical protein (372 aa)
   
    0.704
slr0876
Hypothetical protein (409 aa)
   
 
  0.680
sll1496
Mannose-1-phosphate guanyltransferase (843 aa)
   
   
  0.637
slr0596
Creatinine amidohydrolase (273 aa)
       
    0.630
sll0596
Hypothetical protein (244 aa)
       
    0.630
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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