STRINGSTRING
slr1928 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1928" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1928Hypothetical protein (194 aa)    
Predicted Functional Partners:
slr1929
Hypothetical protein (183 aa)
         
  0.837
slr1085
Hypothetical protein (424 aa)
           
  0.691
slr1084
Hypothetical protein (146 aa)
           
  0.691
slr1931
Hypothetical protein (305 aa)
         
  0.653
slr1927
Hypothetical protein (406 aa)
              0.614
slr1926
Hypothetical protein (223 aa)
              0.614
slr0977
ABC transporter (276 aa)
           
  0.555
pcxA
Proton extrusion protein PcxA; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport (440 aa)
           
  0.550
slr1930
Hypothetical protein (186 aa)
              0.540
sll1685
Heme-binding proton extrusion protein PcxA; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake (By similarity) (393 aa)
           
  0.520
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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