STRINGSTRING
slr1929 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1929" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1929Hypothetical protein (183 aa)    
Predicted Functional Partners:
sll1930
Transposase (164 aa)
           
  0.841
slr1928
Hypothetical protein (194 aa)
         
  0.837
slr1930
Hypothetical protein (186 aa)
         
0.634
slr1565
Hypothetical protein (113 aa)
           
  0.628
slr1927
Hypothetical protein (406 aa)
              0.582
slr1926
Hypothetical protein (223 aa)
              0.582
slr1456
Type 4 pilin-like protein (175 aa)
           
  0.539
slr1931
Hypothetical protein (305 aa)
              0.526
slr2016
Hypothetical protein (158 aa)
           
  0.521
SYNGTS_2589
General secretion pathway protein E (813 aa)
   
 
  0.503
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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