STRINGSTRING
slr1946 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1946" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1946Hypothetical protein (261 aa)    
Predicted Functional Partners:
ssl2781
Hypothetical protein (82 aa)
   
          0.778
sll0066
Hypothetical protein (315 aa)
   
          0.769
sll0413
Hypothetical protein (207 aa)
   
          0.769
ssr0109
Hypothetical protein (62 aa)
   
          0.767
slr0250
Hypothetical protein (178 aa)
   
          0.763
slr0013
Hypothetical protein (175 aa)
   
          0.751
sll1573
Hypothetical protein (104 aa)
   
          0.751
slr1533
Hypothetical protein (115 aa)
   
          0.747
sll0319
Hypothetical protein (297 aa)
   
          0.745
slr1908
Hypothetical protein (591 aa)
   
          0.745
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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